On Zoom: IDSC Fellows Final Presentations

April 30, 2020 @ 2:00 pm - 4:00 pm

Free

University of Miami Institute for Data Science & Computing 2019-2020 CCS Fellows

Join us on Thursday, April 30, at 2:00 PM via Zoom, for the 2019-2020 IDSC Fellows’ final project presentations. This event is open to interested UM Faculty/Staff/Students.

The vision of the IDSC Fellows Program is to inspire a new generation of leaders in computational science to cross the traditional boundaries between disciplines, by equipping them with new cross-disciplinary skills and experience. The Program does this by offering mentorship outside the students’ area of expertise. “IDSC Fellow” is a prestigious designation awarded to two undergraduate students and two graduate students per year.

https://miami.zoom.us/j/8099371251?pwd=NjdIODhnVXQxYnlpdHRZSXNleDVMQT09 Link includes password.

Meet the 2019-2020 IDSC Fellows:

On Zoom: IDSC Fellows Final Presentations

	Chitra Banarjee Project: Movement and Social Approach in Children with Autism Spectrum Disorder Mentors: Gang Ren, PhD \| IDSC AI + Machine Learning Daniel S. Messinger, PhD \| Professor of Psychology Chitra is an undergraduate at UM studying Biochemistry & Molecular Biology and Mathematics (Applied Analysis) with a minor in Chemistry. She’s currently working under Dr. Daniel Messinger in the Interactive Behavior in Schools (IBIS) project to understand social movement and approach in children with autism spectrum disorder (ASD) through objective, continuous measurements. As an IDSC Fellow, she hopes to explore the potential of automated behavioral measurement for objectively describing the ASD phenotype through quantification of the social movement deficits characteristic of children with ASD in their interactions with their peers.
	Anthony Mario Bonacolta Project: Single-cell Transcriptomic Sequencing of a Coral during the Bleaching Process Mentors: Ben Kirtman, PhD \| Deputy Director, Institute for Data Science and Computing Director, IDSC Atmosphere, Ocean, and Earth Science Professor of Atmospheric Sciences, RSMAS Javier del Campo, PhD \| Assistant Professor, Department of Marine Biology and Ecology, RSMAS Anthony is a first year PhD student in Dr. Javier del Campo’s Marine Microbial Ecology and Evolution Laboratory in the Marine Biology and Ecology Department at the Rosenstiel School of Marine and Atmospheric Science (RSMAS). His research focuses on the role of micro-eukaryotes and bacteria in marine organisms.
	Jia Geng Project: Developing Deep Learning Models for Rotifer (Bachionus spp.) Detection and Classification Mentors: Amin Sarafraz, PhD \| IDSC Software Engineering Research Assistant Professor, College of Engineering Daniel Benetti, PhD \| Director of Aquaculture and Professor, Department of Marine Ecosystems and Society Jia is currently a PhD student in Marine Ecosystem and Society under the supervision of Dr. Daniel Benetti. He received his BS in Aquaculture from the Ocean University of China in 2015 and Graduate Certification in Data Science Foundations from North Carolina State University in 2019. His doctoral research centers on developing AI systems to automated live feed cultivation for fish hatcheries. During the IDSC Fellows program, he hopes to apply deep learning models to achieve high accuracy rotifer detection and classification. His project website can be reached via GitHub: gengjia0214/AIRoti. Jia was recently awarded an AI for Earth Microsoft Azure sponsored grant. Microsoft’s AI for Earth program awards support projects that change the way people and organizations monitor, model, and ultimately manage Earth’s natural systems.
	Karna Nagalla Project: Computational Approaches to Microbiome Alterations and Disease States Mentors: Sylvia Daunert, PhD Professor of Biochemistry and Molecular Biology, Lucille P. Markey Chair of Biochemistry and Molecular Biology Director, Dr. J. T. MacDonald Biomedical Nanotechnology Institute Director of Research, Center for Integrative and Complementary Medicine Gregory O’Connor, PhD \| Post Doctoral Associate, Department of Biochemistry & Molecular Biology Karna is an undergraduate at the University of Miami studying Microbiology/Immunology and Applied Math with a minor in Chemistry and Electrical Engineering. He will be working under Dr. Sylvia Daunert and Dr. Gregory O’Connor to analyze human microbiome changes caused by various diseases and their progression. Through the IDSC Fellowship, he hopes to continue learning different analyses programs to analyze massive amounts of data as well as gain a further understanding of the human microbiome and its potential role in disease treatments.

Details

Date:: April 30, 2020
Time:: 2:00 pm - 4:00 pm
Cost:: Free
Event Category:: CCS Fellows
Event Tags:: Anthony Bonacolta, CCS Fellows, Chitra Banarjee, Jia Geng, Karna Nagalla

Venue

: Newman Alumni Center
: 6200 San Amaro Drive
Coral Gables, FL 33146 United States + Google Map
Phone: 305-284-1934
: View Venue Website

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	Chitra Banarjee Project: Movement and Social Approach in Children with Autism Spectrum Disorder Mentors: Gang Ren, PhD \| IDSC AI + Machine Learning Daniel S. Messinger, PhD \| Professor of Psychology Chitra is an undergraduate at UM studying Biochemistry & Molecular Biology and Mathematics (Applied Analysis) with a minor in Chemistry. She’s currently working under Dr. Daniel Messinger in the Interactive Behavior in Schools (IBIS) project to understand social movement and approach in children with autism spectrum disorder (ASD) through objective, continuous measurements. As an IDSC Fellow, she hopes to explore the potential of automated behavioral measurement for objectively describing the ASD phenotype through quantification of the social movement deficits characteristic of children with ASD in their interactions with their peers.
	Anthony Mario Bonacolta Project: Single-cell Transcriptomic Sequencing of a Coral during the Bleaching Process Mentors: Ben Kirtman, PhD \| Deputy Director, Institute for Data Science and Computing Director, IDSC Atmosphere, Ocean, and Earth Science Professor of Atmospheric Sciences, RSMAS Javier del Campo, PhD \| Assistant Professor, Department of Marine Biology and Ecology, RSMAS Anthony is a first year PhD student in Dr. Javier del Campo’s Marine Microbial Ecology and Evolution Laboratory in the Marine Biology and Ecology Department at the Rosenstiel School of Marine and Atmospheric Science (RSMAS). His research focuses on the role of micro-eukaryotes and bacteria in marine organisms.
	Jia Geng Project: Developing Deep Learning Models for Rotifer (Bachionus spp.) Detection and Classification Mentors: Amin Sarafraz, PhD \| IDSC Software Engineering Research Assistant Professor, College of Engineering Daniel Benetti, PhD \| Director of Aquaculture and Professor, Department of Marine Ecosystems and Society Jia is currently a PhD student in Marine Ecosystem and Society under the supervision of Dr. Daniel Benetti. He received his BS in Aquaculture from the Ocean University of China in 2015 and Graduate Certification in Data Science Foundations from North Carolina State University in 2019. His doctoral research centers on developing AI systems to automated live feed cultivation for fish hatcheries. During the IDSC Fellows program, he hopes to apply deep learning models to achieve high accuracy rotifer detection and classification. His project website can be reached via GitHub: gengjia0214/AIRoti. Jia was recently awarded an AI for Earth Microsoft Azure sponsored grant. Microsoft’s AI for Earth program awards support projects that change the way people and organizations monitor, model, and ultimately manage Earth’s natural systems.
	Karna Nagalla Project: Computational Approaches to Microbiome Alterations and Disease States Mentors: Sylvia Daunert, PhD Professor of Biochemistry and Molecular Biology, Lucille P. Markey Chair of Biochemistry and Molecular Biology Director, Dr. J. T. MacDonald Biomedical Nanotechnology Institute Director of Research, Center for Integrative and Complementary Medicine Gregory O’Connor, PhD \| Post Doctoral Associate, Department of Biochemistry & Molecular Biology Karna is an undergraduate at the University of Miami studying Microbiology/Immunology and Applied Math with a minor in Chemistry and Electrical Engineering. He will be working under Dr. Sylvia Daunert and Dr. Gregory O’Connor to analyze human microbiome changes caused by various diseases and their progression. Through the IDSC Fellowship, he hopes to continue learning different analyses programs to analyze massive amounts of data as well as gain a further understanding of the human microbiome and its potential role in disease treatments.