Publications
Morphological adornment of text in Text Encoding Initiative (TEI) XML can be useful for studies in textual analysis. MorphAdorner is a principal tool for providing such functionality in English texts. However, its practical use is limited when the input XML contains branching text, e.g. Read more “Hoshi: A Japanese Morphological Adorner for TEI XML”
Publications
There is an expectation that scientists will archive their experimental data online in public repositories to enable other investigators to verify their work and to re-explore their data in search of new discoveries. When left to their own devices, however, scientists do a poor job creating the metadata that describe their datasets. Read more “CEDAR: Semantic Web Technology to Support Open Science”
News - Archived
The National Institutes of Health Library of Integrated Network-based Cellular Signatures (LINCS) program is generating extensive multidimensional data sets, including biochemical, genome-wide transcriptional, and phenotypic cellular response signatures to a variety of small-molecule and genetic perturbations with the goal of creating a sustainable, widely applicable, and readily accessible systems biology knowledge resource. Integration and analysis of diverse LINCS data sets depend on the availability of sufficient metadata to describe the assays and screening results and on their syntactic, structural, and semantic consistency. Read more “Data Standards for LINCS Project Published”